Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029571 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:94464106-94465885 (+) |
| Description | Similar to Os05g0155601: Importin subunit alpha-1b (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029571 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g02150 |
Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope (By similarity). | |
At3g06720 |
Binds to conventional NLS motifs with high affinity in the absence of an importin beta subunit. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os05g0155601 |
Functions in nuclear protein import. | No verified direct reference in this release |
Os01g0253300 |
Functions in nuclear protein import. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006606 | protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.667; coverage=13.681; evalue=1.01e-09; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006607 | NLS-bearing protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.81; coverage=13.681; evalue=3.22e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.842; coverage=37.134; evalue=6.37e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.667; coverage=13.681; evalue=1.01e-09; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.667; coverage=13.681; evalue=1.01e-09; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.667; coverage=13.681; evalue=1.01e-09; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.81; coverage=13.681; evalue=3.22e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.667; coverage=13.681; evalue=1.01e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.667; coverage=13.681; evalue=1.01e-09; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.259; coverage=17.59; evalue=2.49e-11; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.667; coverage=13.681; evalue=1.01e-09; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042564 | NLS-dependent protein nuclear import complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.81; coverage=13.681; evalue=3.22e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.81; coverage=13.681; evalue=3.22e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008139 | nuclear localization sequence binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.81; coverage=13.681; evalue=3.22e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061608 | nuclear import signal receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.81; coverage=13.681; evalue=3.22e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G06720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.667; coverage=13.681; evalue=1.01e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G02150 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.842; coverage=37.134; evalue=6.37e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:543535 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.259; coverage=17.59; evalue=2.49e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release |