Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029538 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:93431867-93433281 (+) |
| Description | Similar to WRKY41: Probable WRKY transcription factor 41 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029538 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 29 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g11070 |
Transcription factor. | No verified direct reference in this release |
At4g23810 |
Transcription factor. |
The antagonist function of Arabidopsis WRKY53 and ESR/ESP in leaf senescence is modulated by the jasmonic and salicylic acid equilibrium.2007 · DOI: 10.1105/tpc.106.042705
|
At5g24110 |
Transcription factor. | No verified direct reference in this release |
At2g46400 |
Transcription factor involved in the regulation of osmotic stress responses and stomatal movement. |
EDS1 contributes to nonhost resistance of Arabidopsis thaliana against Erwinia amylovora.2012 · DOI: 10.1094/mpmi-05-11-0111 Arabidopsis WRKY46 coordinates with WRKY70 and WRKY53 in basal resistance against pathogen Pseudomonas syringae.2012 · DOI: 10.1016/j.plantsci.2011.12.003
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os05g0571200 |
May play a role in defense responses. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.392; coverage=58.154; evalue=5.72e-29; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009617 | response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009751 | response to salicylic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010193 | response to ozone | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031347 | regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033198 | response to ATP | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042542 | response to hydrogen peroxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048527 | lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071456 | cellular response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=HEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900457 | regulation of brassinosteroid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000022 | regulation of jasmonic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000070 | regulation of response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.661; coverage=77.231; evalue=7.85e-41; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000987 | cis-regulatory region sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G46400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.196; coverage=61.231; evalue=5.93e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G11070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.416; coverage=104.923; evalue=1.87e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G23810 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.956; coverage=90.154; evalue=6.76e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G24110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.661; coverage=77.231; evalue=7.85e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0571200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.392; coverage=58.154; evalue=5.72e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release |