Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029311 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:87115734-87116258 (+) |
| Description | Similar to ELIP1: Early light-induced protein 1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029311 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g22840 |
Prevents excess accumulation of free chlorophyll by inhibiting the entire chlorophyll biosynthesis pathway (e.g. 5-aminolevulinate synthesis and Mg-protoporphyrin IX chelatase activity), and hence prevent photooxidative stress (By similarity). |
Early light-induced proteins protect Arabidopsis from photooxidative stress.2003 · DOI: 10.1073/pnas.0736939100 Mutational and expression analysis of ELIP1 and ELIP2 in Arabidopsis thaliana.2005 · DOI: 10.1007/s11103-005-4090-1
|
At4g14690 |
Probably involved in the integration of pigments into the mature light-harvesting pigment-protein complexes. |
Mutational and expression analysis of ELIP1 and ELIP2 in Arabidopsis thaliana.2005 · DOI: 10.1007/s11103-005-4090-1 Suppression of both ELIP1 and ELIP2 in Arabidopsis does not affect tolerance to photoinhibition and photooxidative stress.2006 · DOI: 10.1104/pp.106.083055
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010030 | positive regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010114 | response to red light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.123; coverage=93.678; evalue=8.08e-57; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010117 | photoprotection | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010218 | response to far red light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.123; coverage=93.678; evalue=8.08e-57; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.123; coverage=93.678; evalue=8.08e-57; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010380 | regulation of chlorophyll biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015979 | photosynthesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034605 | cellular response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071483 | cellular response to blue light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071486 | cellular response to high light intensity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071490 | cellular response to far red light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071491 | cellular response to red light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071492 | cellular response to UV-A | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009522 | photosystem I | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009523 | photosystem II | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031969 | chloroplast membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.621; coverage=97.126; evalue=1.19e-56; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G22840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.209; coverage=98.851; evalue=6.98e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G14690 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.123; coverage=93.678; evalue=8.08e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release |