Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029168 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:82161924-82165268 (+) |
| Description | Similar to ESD4: Ubiquitin-like-specific protease ESD4 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029168 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 26 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g15880 |
Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. | |
At4g00690 |
Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. | No verified direct reference in this release |
At3g06910 |
Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009911 | positive regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016055 | Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016485 | protein processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.344; coverage=47.843; evalue=3.84e-43; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016925 | protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016926 | protein desumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030111 | regulation of Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031397 | negative regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=IDA:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031398 | positive regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031648 | protein destabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051028 | mRNA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120292 | positive regulation of mitotic recombination-dependent replication fork processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.344; coverage=47.843; evalue=3.84e-43; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.344; coverage=47.843; evalue=3.84e-43; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005643 | nuclear pore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.308; coverage=96.863; evalue=1.83e-110; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.344; coverage=47.843; evalue=3.84e-43; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.308; coverage=96.863; evalue=1.83e-110; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031965 | nuclear membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034399 | nuclear periphery | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.344; coverage=47.843; evalue=3.84e-43; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016929 | deSUMOylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019900 | kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070139 | SUMO-specific endopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G06910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.308; coverage=96.863; evalue=1.83e-110 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G00690 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.126; coverage=46.667; evalue=1.03e-112 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G15880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.669; coverage=106.667; evalue=9.94e-138 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:59343 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.603; coverage=47.451; evalue=2.49e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2540734 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.344; coverage=47.843; evalue=3.84e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release |