Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_028970 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:76235105-76239393 (-) |
| Description | Similar to TON2: Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_028970 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g18580 |
Probable regulatory subunit of type 2A protein phosphatase involved in the control of the dynamic organization of the cortical cytoskeleton. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000226 | microtubule cytoskeleton organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000913 | preprophase band assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002759 | regulation of antimicrobial humoral response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009826 | unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030865 | cortical cytoskeleton organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032147 | activation of protein kinase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035303 | regulation of dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051900 | regulation of mitochondrial depolarization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.261; coverage=95.833; evalue=9.81e-95; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005929 | cilium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.261; coverage=95.833; evalue=9.81e-95; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009524 | phragmoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015629 | actin cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.261; coverage=95.833; evalue=9.81e-95; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005509 | calcium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G18580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.597; coverage=98.125; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:533147 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.826; coverage=95.833; evalue=1.09e-94 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:55012 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.609; coverage=95.833; evalue=2.6e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:59032 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.261; coverage=95.833; evalue=9.81e-95 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:362739 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.043; coverage=95.833; evalue=8.81e-95 | UniProtKB/Swiss-Prot DAT 2026 current_release |