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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_028894
Query referenceOH1004
LocationChr06:73684614-73689067 (+)
DescriptionSimilar to BAM9: Inactive beta-amylase 9 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_028894 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 10 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g18670 Inactive beta-amylase 9. No verified direct reference in this release
At4g17090 Beta-amylase activity.
RNA interference of Arabidopsis beta-amylase8 prevents maltose accumulation upon cold shock and increases sensitivity of PSII photochemical efficiency to freezing stress.2005 · DOI: 10.1111/j.1365-313x.2005.02565.x
Glucan, water dikinase activity stimulates breakdown of starch granules by plastidial beta-amylases.2007 · DOI: 10.1104/pp.107.104224
At3g23920 Beta-amylase activity.
Glucan, water dikinase activity stimulates breakdown of starch granules by plastidial beta-amylases.2007 · DOI: 10.1104/pp.107.104224
At5g55700 No alpha-1,4-glucan hydrolase activity, including beta-amylase, alpha-amylase, a-glucosidase or alpha-amyloglucosidase.
Beta-AMYLASE4, a noncatalytic protein required for starch breakdown, acts upstream of three active beta-amylases in Arabidopsis chloroplasts.2008 · DOI: 10.1105/tpc.107.056507
Catalytically-inactive beta-amylase BAM4 required for starch breakdown in Arabidopsis leaves is a starch-binding-protein.2009 · DOI: 10.1016/j.abb.2009.07.024

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0141200 Possesses beta-amylase activity in vitro. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000024maltose biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.281; coverage=79.221; evalue=4.78e-109; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005983starch catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.93; coverage=92.208; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.281; coverage=79.221; evalue=4.78e-109; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009414response to water deprivationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.495; coverage=86.271; evalue=6.59e-102; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.93; coverage=92.208; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.93; coverage=92.208; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.281; coverage=79.221; evalue=4.78e-109; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.281; coverage=79.221; evalue=4.78e-109; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009570chloroplast stromaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.281; coverage=79.221; evalue=4.78e-109; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016161beta-amylase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.93; coverage=92.208; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G23920KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.495; coverage=86.271; evalue=6.59e-102UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G17090KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.281; coverage=79.221; evalue=4.78e-109UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G18670KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.93; coverage=92.208; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G55700KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.416; coverage=83.302; evalue=1.38e-95UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0141200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.261; coverage=80.334; evalue=2.65e-107UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4331577KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.261; coverage=80.334; evalue=2.65e-107UniProtKB/Swiss-Prot DAT 2026 current_release