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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_028847
Query referenceOH1004
LocationChr06:70648111-70648913 (-)
Description
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_028847 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
UniProt: F4HRV8 Required for normal meiosis in male and female gametophytes. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os09g0506800 Essential factor for meiotic homologous chromosome pairing (synapsis).
An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis.2004 · DOI: 10.1007/s00438-003-0934-z
PAIR2 is essential for homologous chromosome synapsis in rice meiosis I.2006 · DOI: 10.1242/jcs.02736

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0007129homologous chromosome pairing at meiosisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007130synaptonemal complex assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009554megasporogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.222; coverage=113.208; evalue=1.15e-27; UniProt GO evidence=IDA:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009556microsporogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.222; coverage=113.208; evalue=1.15e-27; UniProt GO evidence=IDA:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051026chiasma assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051598meiotic recombination checkpoint signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000228nuclear chromosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.222; coverage=113.208; evalue=1.15e-27; UniProt GO evidence=IDA:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000775chromosome, centromeric regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.222; coverage=113.208; evalue=1.15e-27; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000785chromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000794condensed nuclear chromosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000795synaptonemal complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.222; coverage=113.208; evalue=1.15e-27; UniProt GO evidence=IDA:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005694chromosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G67370KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=109.434; evalue=3.65e-29UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os09g0506800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.222; coverage=113.208; evalue=1.15e-27UniProtKB/Swiss-Prot DAT 2026 current_release