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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_028754
Query referenceOH1004
LocationChr06:61139156-61151679 (+)
DescriptionSimilar to GAL1: Galactokinase (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_028754 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g06580 Sugar-1-kinase with a very high substrate specificity for the alpha-anomeric configuration of D-galacose (D-Gal). No verified direct reference in this release
At3g03920 Required for ribosome biogenesis. No verified direct reference in this release
At5g18180 Required for ribosome biogenesis. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000454snoRNA guided rRNA pseudouridine synthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006012galactose metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=10.146; evalue=3.47e-15; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046835carbohydrate phosphorylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=10.146; evalue=3.47e-15; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=10.146; evalue=3.47e-15; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=10.146; evalue=3.47e-15; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009535chloroplast thylakoid membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010494cytoplasmic stress granuleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031429box H/ACA snoRNP complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004335galactokinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=10.146; evalue=3.47e-15; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=10.146; evalue=3.47e-15; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034513box H/ACA snoRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=10.146; evalue=3.47e-15; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G03920KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.347; coverage=4.479; evalue=8.34e-13UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G06580KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=10.146; evalue=3.47e-15UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G18180KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=63.265; coverage=4.479; evalue=2.19e-11UniProtKB/Swiss-Prot DAT 2026 current_release