Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_028639 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:50837619-50838639 (-) |
| Description | Similar to Pathogenesis-related thaumatin-like protein 3.5 (Cryptomeria japonica OX%3D3369) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_028639 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 17 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g75040 |
Partially responsible for acquired pathogen resistance. | No verified direct reference in this release |
At1g18250 |
Thaumatin-like protein. | No verified direct reference in this release |
At4g24180 |
Involved in local responses of roots to colonization by non-pathogenic plant growth-promoting rhizobacteria (PGPR) fluorescent Pseudomonas spp., but does not seem to be required for the establishment of subsequent induced systemic resistance (ISR). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.673; coverage=75.352; evalue=9.64e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009615 | response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009617 | response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.817; coverage=88.38; evalue=2.35e-65; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009627 | systemic acquired resistance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009682 | induced systemic resistance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.817; coverage=88.38; evalue=2.35e-65; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.817; coverage=88.38; evalue=2.35e-65; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.673; coverage=75.352; evalue=9.64e-79; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031540 | regulation of anthocyanin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046686 | response to cadmium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099503 | secretory vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G18250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.66; coverage=74.648; evalue=2.74e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G75040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.064; coverage=82.746; evalue=1.31e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G24180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.817; coverage=88.38; evalue=2.35e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mdm:103411735 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.119; coverage=77.113; evalue=5e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release |