Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_028104 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:31405746-31407633 (+) |
| Description | Similar to OS9: Protein OS-9 homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_028104 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 18 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g35080 |
Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os06g0644800 |
Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.931; coverage=58.784; evalue=5e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006605 | protein targeting | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.356; coverage=58.784; evalue=1.33e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006621 | protein retention in ER lumen | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.931; coverage=58.784; evalue=5e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.356; coverage=58.784; evalue=1.33e-25; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030968 | endoplasmic reticulum unfolded protein response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030970 | retrograde protein transport, ER to cytosol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034976 | response to endoplasmic reticulum stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.931; coverage=58.784; evalue=5e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036503 | ERAD pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904153 | negative regulation of retrograde protein transport, ER to cytosol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.356; coverage=58.784; evalue=1.33e-25; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000836 | Hrd1p ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.356; coverage=58.784; evalue=1.33e-25; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005788 | endoplasmic reticulum lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.356; coverage=58.784; evalue=1.33e-25; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002020 | protease binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.356; coverage=58.784; evalue=1.33e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030246 | carbohydrate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140032 | glycosylation-dependent protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.356; coverage=58.784; evalue=1.33e-25; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G35080 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.244; coverage=95.608; evalue=3.93e-112 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:504832 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.931; coverage=58.784; evalue=5e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os06g0644800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.308; coverage=87.838; evalue=1.28e-103 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10956 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.356; coverage=58.784; evalue=1.33e-25 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:216440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.207; coverage=58.784; evalue=2.18e-24 | UniProtKB/Swiss-Prot DAT 2026 current_release |