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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_027979
Query referenceOH1004
LocationChr06:28057630-28062394 (-)
DescriptionSimilar to AIM1: Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_027979 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g29010 Involved in peroxisomal fatty acid beta-oxidation.
A defect in beta-oxidation causes abnormal inflorescence development in Arabidopsis.1999 · DOI: 10.1105/tpc.11.10.1911
Jasmonate biosynthesis in Arabidopsis thaliana requires peroxisomal beta-oxidation enzymes--additional proof by properties of pex6 and aim1.2007 · DOI: 10.1016/j.phytochem.2007.04.024
The multifunctional protein in peroxisomal beta-oxidation: structure and substrate specificity of the Arabidopsis thaliana protein MFP2.2010 · DOI: 10.1074/jbc.m110.106005
At3g06860 Involved in peroxisomal fatty acid beta-oxidation during seed germination.
The Arabidopsis thaliana multifunctional protein gene (MFP2) of peroxisomal beta-oxidation is essential for seedling establishment.2006 · DOI: 10.1111/j.1365-313x.2005.02650.x
The multifunctional protein in peroxisomal beta-oxidation: structure and substrate specificity of the Arabidopsis thaliana protein MFP2.2010 · DOI: 10.1074/jbc.m110.106005
Peroxisomal β-oxidation regulates histone acetylation and DNA methylation in Arabidopsis .2019 · DOI: 10.1073/pnas.1904143116

Rice

Reference gene IDPossible functionPapers / DOI
Os02g0274100 Multifunctional enzyme involved in fatty acid beta-oxidation. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006635fatty acid beta-oxidationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009695jasmonic acid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009845seed germinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IMP:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.804; coverage=98.906; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005777peroxisomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.804; coverage=98.906; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005874microtubuleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.728; coverage=99.726; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009505plant-type cell wallCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009514glyoxysomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.039; coverage=98.222; evalue=0.0; UniProt GO evidence=NAS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.728; coverage=99.726; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003857(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004165delta(3)-delta(2)-enoyl-CoA isomerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004300enoyl-CoA hydratase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008017microtubule bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.728; coverage=99.726; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00086923-hydroxybutyryl-CoA epimerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00188123-hydroxyacyl-CoA dehydratase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070403NAD+ bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G06860KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.804; coverage=98.906; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G29010KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.215; coverage=99.726; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbna:106389027KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.069; coverage=99.179; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGcsv:101210295KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.039; coverage=98.222; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os02g0274100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.728; coverage=99.726; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release