Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_027753 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:23143847-23145726 (-) |
| Description | Similar to slx1: Structure-specific endonuclease subunit slx1 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_027753 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.965; coverage=66.279; evalue=1.21e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.398; coverage=65.698; evalue=3.82e-12; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.398; coverage=65.698; evalue=3.82e-12; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031297 | replication fork processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12; UniProt GO evidence=TAS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043007 | maintenance of rDNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902681 | regulation of replication fork arrest at rDNA repeats | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000228 | nuclear chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.398; coverage=65.698; evalue=3.82e-12; UniProt GO evidence=HTP:Others | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030875 | rDNA protrusion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033557 | Slx1-Slx4 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.965; coverage=66.279; evalue=1.21e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008821 | crossover junction DNA endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.965; coverage=66.279; evalue=1.21e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017108 | 5'-flap endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.965; coverage=66.279; evalue=1.21e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106332 | ds/ssDNA junction-specific dsDNA endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990238 | double-stranded DNA endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | spo:2541657 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.698; coverage=50.0; evalue=1.84e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | tbr:Tb927.3.1220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.398; coverage=65.698; evalue=3.82e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | uma:UMAG_01857 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.965; coverage=66.279; evalue=1.21e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |