Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_026900 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:4988962-4990763 (-) |
| Description | Similar to Nsmce3: Non-structural maintenance of chromosomes element 3 homolog (Mus musculus OX%3D10090) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026900 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.144; coverage=66.27; evalue=9.89e-13; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.059; coverage=67.46; evalue=2.86e-09; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016925 | protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.144; coverage=66.27; evalue=9.89e-13; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031398 | positive regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032204 | regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.144; coverage=66.27; evalue=9.89e-13; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034644 | cellular response to UV | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045746 | negative regulation of Notch signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.059; coverage=67.46; evalue=2.86e-09; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045787 | positive regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.097; coverage=61.508; evalue=2.07e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071478 | cellular response to radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072711 | cellular response to hydroxyurea | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140588 | chromatin looping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.144; coverage=66.27; evalue=9.89e-13; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.144; coverage=66.27; evalue=9.89e-13; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.059; coverage=67.46; evalue=2.86e-09; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.059; coverage=67.46; evalue=2.86e-09; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030915 | Smc5-Smc6 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042826 | histone deacetylase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.654; coverage=75.794; evalue=7.77e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046983 | protein dimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | hsa:4100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.059; coverage=67.46; evalue=2.86e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4103 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.097; coverage=61.508; evalue=2.07e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4107 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.654; coverage=75.794; evalue=7.77e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:56160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.144; coverage=66.27; evalue=9.89e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:66647 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.94; coverage=66.27; evalue=1.64e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release |