Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_026783 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:2838554-2839372 (-) |
| Description | Similar to TCP9: Transcription factor TCP9 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026783 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g45680 |
Transcription factor TCP9. | No verified direct reference in this release |
At5g51910 |
Transcription factor TCP19. | No verified direct reference in this release |
At1g69690 |
Transcription factor involved the regulation of plant development. |
TCP14 and TCP15 affect internode length and leaf shape in Arabidopsis.2011 · DOI: 10.1111/j.1365-313x.2011.04674.x The Arabidopsis O-linked N-acetylglucosamine transferase SPINDLY interacts with class I TCPs to facilitate cytokinin responses in leaves and flowers.2012 · DOI: 10.1105/tpc.111.093518 The Arabidopsis immune adaptor SRFR1 interacts with TCP transcription factors that redundantly contribute to effector-triggered immunity.2014 · DOI: 10.1111/tpj.12527 The ubiquitin receptors DA1, DAR1, and DAR2 redundantly regulate endoreduplication by modulating the stability of TCP14/15 in Arabidopsis.2015 · DOI: 10.1105/tpc.114.132274
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os08g0544800 |
Transcription activator. | |
UniProt: A2YXQ1 |
Transcription activator. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008361 | regulation of cell size | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009624 | response to nematode | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009735 | response to cytokinin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010229 | inflorescence development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031347 | regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.667; coverage=88.235; evalue=9.95e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031540 | regulation of anthocyanin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042023 | DNA endoreduplication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.889; coverage=66.176; evalue=1.91e-41; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048467 | gynoecium development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080086 | stamen filament development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140964 | intracellular auxin homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900056 | negative regulation of leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001216 | DNA-binding transcription activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.889; coverage=66.176; evalue=1.91e-41; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.889; coverage=66.176; evalue=1.91e-41; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G69690 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.518; coverage=30.515; evalue=3.36e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G45680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.754; coverage=68.75; evalue=9.84e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G51910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.667; coverage=88.235; evalue=9.95e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0544800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.889; coverage=66.176; evalue=1.91e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release |