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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_026656
Query referenceOH1004
LocationChr06:967086-971136 (-)
DescriptionSimilar to RH42: DEAD-box ATP-dependent RNA helicase 42 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_026656 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g20920 Helicase required for pre-mRNA splicing, cold-responsive gene regulation and cold tolerance.
A DEAD box RNA helicase is critical for pre-mRNA splicing, cold-responsive gene regulation, and cold tolerance in Arabidopsis.2013 · DOI: 10.1105/tpc.112.108340
At3g09620 DEAD-box ATP-dependent RNA helicase 45. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os08g0154200 DEAD-box ATP-dependent RNA helicase 45. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000398mRNA splicing, via spliceosomeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035196miRNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1903241U2-type prespliceosome assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.053; coverage=80.639; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0001650fibrillar centerCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.273; coverage=80.639; evalue=0.0; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005684U2-type spliceosomal complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.053; coverage=80.639; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015030Cajal bodyCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.053; coverage=80.639; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016607nuclear speckCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.053; coverage=80.639; evalue=0.0; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003724RNA helicase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060090molecular adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G20920KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.597; coverage=83.837; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G09620KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.092; coverage=76.821; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os08g0154200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.205; coverage=78.686; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:212880KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.273; coverage=80.639; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:245957KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.053; coverage=80.639; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release