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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_026643
Query referenceOH1004
LocationChr06:805816-807111 (-)
DescriptionSimilar to CBL4: Calcineurin B-like protein 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_026643 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g24270 May act as a calcium sensor regulating intracellular Na⁺/K⁺ homeostasis and salt tolerance.
The Arabidopsis SOS2 protein kinase physically interacts with and is activated by the calcium-binding protein SOS3.2000 · DOI: 10.1073/pnas.97.7.3735
SOS3 function in plant salt tolerance requires N-myristoylation and calcium binding.2000 · DOI: 10.1105/tpc.12.9.1667
Regulation of SOS1, a plasma membrane Na+/H+ exchanger in Arabidopsis thaliana, by SOS2 and SOS3.2002 · DOI: 10.1073/pnas.122224699
Calcium-dependent modulation and plasma membrane targeting of the AKT2 potassium channel by the CBL4/CIPK6 calcium sensor/protein kinase complex.2011 · DOI: 10.1038/cr.2011.50
Arabidopsis SOS3 plays an important role in salt tolerance by mediating calcium-dependent microfilament reorganization.2013 · DOI: 10.1007/s00299-012-1348-3

Rice

Reference gene IDPossible functionPapers / DOI
Os02g0291000 Acts as a calcium sensor. No verified direct reference in this release
Os05g0534400 Acts as a calcium sensor involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance.
Conservation of the salt overly sensitive pathway in rice.2007 · DOI: 10.1104/pp.106.092635
Os02g0291400 Acts as a calcium sensor.
Expression analysis of the calcineurin B-like gene family in rice (Oryza sativa L.) under environmental stresses.2008 · DOI: 10.1016/j.gene.2008.02.011
Os10g0564800 Acts as a calcium sensor. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0005513detection of calcium ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019722calcium-mediated signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030007intracellular potassium ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042539hypotonic salinity responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071472cellular response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005955calcineurin complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032578aleurone grain membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.535; coverage=99.537; evalue=1.33e-86; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004723calcium-dependent protein serine/threonine phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005509calcium ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019900kinase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G24270KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.953; coverage=99.074; evalue=8.64e-92UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os02g0291000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.559; coverage=97.685; evalue=2.9e-90UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os05g0534400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.194; coverage=95.37; evalue=9.33e-88UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:107276173KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.137; coverage=97.685; evalue=5.56e-87UniProtKB/Swiss-Prot DAT 2026 current_release