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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_026543
Query referenceOH1004
LocationChr05:127988744-127991556 (-)
DescriptionSimilar to IRK: Probable LRR receptor-like serine/threonine-protein kinase IRK (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_026543 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g56370 Probable LRR receptor-like serine/threonine-protein kinase IRK. No verified direct reference in this release
At1g17230 Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230. No verified direct reference in this release
At3g25560 Receptor kinase acting, redundantly with other CIKs (e.g. CIK1, CIK2, CIK3, CIK5 and CIK6), as a coreceptor of CLV1, CLV2/CRN and RPK2, and required for CLAVATA-family peptides (e.g. CLV3, CLE25, CLE26 and CLE45) signaling through phosphorylation; this signaling regulates protophloem differentiation and the maintenance of shoot apical meristem (SAM) and root apical meristem (RAM) homeostasis, and acts down-stream of BRX and OPS. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: B8BB68 LRR receptor kinase involved in defense response. No verified direct reference in this release
Os08g0174700 LRR receptor kinase involved in defense response.
Engineering OsBAK1 gene as a molecular tool to improve rice architecture for high yield.2009 · DOI: 10.1111/j.1467-7652.2009.00444.x
A subset of OsSERK genes, including OsBAK1, affects normal growth and leaf development of rice.2011 · DOI: 10.1007/s10059-011-0178-4

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007165signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035556intracellular signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048364root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.178; coverage=90.583; evalue=5.12e-71; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048638regulation of developmental growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051302regulation of cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.178; coverage=90.583; evalue=5.12e-71; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090511periclinal cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.178; coverage=90.583; evalue=5.12e-71; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901653cellular response to peptideBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004674protein serine/threonine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.178; coverage=90.583; evalue=5.12e-71; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004675transmembrane receptor protein serine/threonine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0106310protein serine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G25560KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.333; coverage=98.655; evalue=5.23e-72UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G56370KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.178; coverage=90.583; evalue=5.12e-71UniProtKB/Swiss-Prot DAT 2026 current_release