Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_026451 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:126467001-126475083 (+) |
| Description | Similar to Kdm5a: Lysine-specific demethylase 5A (Mus musculus OX%3D10090) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026451 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 37 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g63490 |
Functions as a histone H3 'Lys-4' (H3K4me) demethylase involved in the regulation of gene expression. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008340 | determination of adult lifespan | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.378; coverage=40.974; evalue=7.37e-108; UniProt GO evidence=IMP:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032922 | circadian regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045814 | negative regulation of gene expression, epigenetic | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045815 | transcription initiation-coupled chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048589 | developmental growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090333 | regulation of stomatal closure | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099402 | plant organ development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140718 | facultative heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IDA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032993 | protein-DNA complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004857 | enzyme inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031490 | chromatin DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032452 | histone demethylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032453 | histone H3K4 demethylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034647 | histone H3K4me/H3K4me2/H3K4me3 demethylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042393 | histone binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G63490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.899; coverage=57.823; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_ZK593.4 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.378; coverage=40.974; evalue=7.37e-108 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5927 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.387; coverage=41.74; evalue=5.08e-119 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:214899 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.518; coverage=41.74; evalue=2.66e-119 | UniProtKB/Swiss-Prot DAT 2026 current_release |