Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_026162 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:122029397-122030484 (-) |
| Description | Similar to LOL1: Protein LOL1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026162 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g32540 |
Positive regulator of reactive oxygen-induced cell death. | |
At4g20380 |
Negative regulator of reactive oxygen-induced cell death, cold stress-induced cell death, pathogen-induced hypersensitive response (HR), basal disease resistance. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os08g0159500 |
Negative regulator of programmed cell death and hypersensitive response (HR). | |
Os12g0611000 |
Putative zinc finger that may be involved in programmed cell death and defense response. | No verified direct reference in this release |
Os03g0639600 |
Putative zinc finger that may be involved in programmed cell death and defense response. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000303 | response to superoxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001666 | response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002240 | response to molecule of oomycetes origin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009626 | plant-type hypersensitive response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009862 | systemic acquired resistance, salicylic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010104 | regulation of ethylene-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010310 | regulation of hydrogen peroxide metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010602 | regulation of 1-aminocyclopropane-1-carboxylate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010618 | aerenchyma formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.915; coverage=97.931; evalue=1.31e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031348 | negative regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.915; coverage=97.931; evalue=1.31e-75; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034051 | negative regulation of plant-type hypersensitive response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.915; coverage=97.931; evalue=1.31e-75; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034052 | positive regulation of plant-type hypersensitive response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043068 | positive regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043069 | negative regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045595 | regulation of cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.915; coverage=97.931; evalue=1.31e-75; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098542 | defense response to other organism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000121 | regulation of removal of superoxide radicals | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G32540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.029; coverage=93.793; evalue=1.53e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G20380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.2; coverage=86.207; evalue=2.16e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0639600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.864; coverage=81.379; evalue=6.9e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0159500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.915; coverage=97.931; evalue=1.31e-75 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os12g0611000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.348; coverage=79.31; evalue=1.54e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release |