Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_026015 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:119802457-119804780 (+) |
| Description | Similar to TIC55: Protein TIC 55%2C chloroplastic (Pisum sativum OX%3D3888) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026015 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g24820 |
Involved in protein precursor import into chloroplasts. | |
At3g44880 |
Catalyzes the key reaction of chlorophyll catabolism, porphyrin macrocycle cleavage of pheophorbide a (pheide a) to a primary fluorescent catabolite (pFCC). | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0146400 |
Catalyzes the key reaction of chlorophyll catabolism, porphyrin macrocycle cleavage of pheophorbide a (pheide a) to a primary fluorescent catabolite (pFCC). | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009812 | flavonoid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.468; coverage=87.103; evalue=1.64e-39; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010154 | fruit development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012501 | programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.514; coverage=87.29; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015996 | chlorophyll catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045036 | protein targeting to chloroplast | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.514; coverage=87.29; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.386; coverage=95.514; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.386; coverage=95.514; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.386; coverage=95.514; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009534 | chloroplast thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009706 | chloroplast inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.514; coverage=87.29; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.386; coverage=95.514; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031969 | chloroplast membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.468; coverage=87.103; evalue=1.64e-39; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004497 | monooxygenase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.468; coverage=87.103; evalue=1.64e-39; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010277 | chlorophyllide a oxygenase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.514; coverage=87.29; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016491 | oxidoreductase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.386; coverage=95.514; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032441 | pheophorbide a oxygenase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.514; coverage=87.29; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051536 | iron-sulfur cluster binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051537 | 2 iron, 2 sulfur cluster binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.514; coverage=87.29; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G24820 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.386; coverage=95.514; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G44880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.248; coverage=101.121; evalue=2.48e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4331611 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.865; coverage=83.178; evalue=4.49e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release |