Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_025947 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:118881201-118881686 (-) |
| Description | Similar to KRS: Stigma-specific STIG1-like protein 4 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025947 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 13 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g50650 |
Endosperm-specific cysteine-rich protein that acts downstream of BHLH95/ZOU to modify the interface between embryo and endosperm and mediate the separation of these two tissues during seed development. | No verified direct reference in this release |
At1g53130 |
Involved in the regulation of cell death induced by extracellular reactive oxygen species. | No verified direct reference in this release |
At1g50720 |
Stigma-specific STIG1-like protein 3. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.083; coverage=82.609; evalue=5.97e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009863 | salicylic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009867 | jasmonic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010193 | response to ozone | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043068 | positive regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.083; coverage=82.609; evalue=5.97e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080141 | regulation of jasmonic acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080142 | regulation of salicylic acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160062 | cutin-based cuticle development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.083; coverage=82.609; evalue=5.97e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.083; coverage=82.609; evalue=5.97e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005615 | extracellular space | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G50650 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.083; coverage=82.609; evalue=5.97e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G50720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.632; coverage=94.41; evalue=4.27e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G53130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.139; coverage=93.789; evalue=2.41e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:543904 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.4; coverage=77.64; evalue=9.85e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |