Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_025805`
Query reference	OH1004
Location	Chr05:117045595-117046257 (+)
Description	Similar to SUFE2: SufE-like protein 2%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_025805 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g67810`	Participates in cysteine desulfurization mediated by NFS2.	Characterization of Arabidopsis thaliana SufE2 and SufE3: functions in chloroplast iron-sulfur cluster assembly and Nad synthesis.2007 · DOI: 10.1074/jbc.m701428200
`At5g50210`	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.	Characterization of Arabidopsis thaliana SufE2 and SufE3: functions in chloroplast iron-sulfur cluster assembly and Nad synthesis.2007 · DOI: 10.1074/jbc.m701428200 The Arabidopsis onset of leaf death5 mutation of quinolinate synthase affects nicotinamide adenine dinucleotide biosynthesis and causes early ageing.2008 · DOI: 10.1105/tpc.107.056341

Rice

Reference gene ID	Possible function	Papers / DOI
`Os12g0290150`	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009060	aerobic respiration	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.02; coverage=67.727; evalue=1.01e-46; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009435	NAD+ biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.02; coverage=67.727; evalue=1.01e-46; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009820	alkaloid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.972; coverage=95.909; evalue=2.73e-47; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016226	iron-sulfur cluster assembly	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=98.182; evalue=2.94e-59; UniProt GO evidence=IC:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0034628	'de novo' NAD+ biosynthetic process from L-aspartate	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.972; coverage=95.909; evalue=2.73e-47; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042179	nicotine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.972; coverage=95.909; evalue=2.73e-47; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=98.182; evalue=2.94e-59; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990228	sulfurtransferase complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=98.182; evalue=2.94e-59; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008047	enzyme activator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=98.182; evalue=2.94e-59; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008987	quinolinate synthetase A activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.972; coverage=95.909; evalue=2.73e-47; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042803	protein homodimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.02; coverage=67.727; evalue=1.01e-46; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.972; coverage=95.909; evalue=2.73e-47; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051539	4 iron, 4 sulfur cluster binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.972; coverage=95.909; evalue=2.73e-47; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0097163	sulfur carrier activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=98.182; evalue=2.94e-59; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G67810	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=98.182; evalue=2.94e-59	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G50210	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.02; coverage=67.727; evalue=1.01e-46	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	nta:107813484	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.172; coverage=65.909; evalue=3.56e-46	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	nta:107817199	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.972; coverage=95.909; evalue=2.73e-47	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:107275865	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.231; coverage=59.091; evalue=2.12e-25	UniProtKB/Swiss-Prot DAT 2026 current_release