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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_025790
Query referenceOH1004
LocationChr05:116933096-116935420 (+)
DescriptionSimilar to TE1: Protein terminal ear1 (Zea mays OX%3D4577)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_025790 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 6 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g61960 Probable RNA-binding transcriptional activator that plays a role in meiosis and vegetative growth. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: A2WY46 Probable RNA-binding protein. No verified direct reference in this release
Os01g0907900 Probable RNA-binding protein.
PLASTOCHRON2 regulates leaf initiation and maturation in rice.2006 · DOI: 10.1105/tpc.105.037622
Os02g0517531 Probable RNA-binding protein that may play a role in growth regulation. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000381regulation of alternative mRNA splicing, via spliceosomeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.299; coverage=98.691; evalue=9.59e-123; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045836positive regulation of meiotic nuclear divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.323; coverage=30.442; evalue=1.32e-32; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045927positive regulation of growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.323; coverage=30.442; evalue=1.32e-32; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016607nuclear speckCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.299; coverage=98.691; evalue=9.59e-123; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.854; coverage=29.133; evalue=1.48e-72; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.299; coverage=98.691; evalue=9.59e-123; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0907900KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=66.111; coverage=29.46; evalue=2.18e-72UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os02g0517531KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.323; coverage=30.442; evalue=1.32e-32UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGzma:541683KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.299; coverage=98.691; evalue=9.59e-123UniProtKB/Swiss-Prot DAT 2026 current_release