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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_025599
Query referenceOH1004
LocationChr05:114030212-114032238 (+)
DescriptionSimilar to SCOA: Succinate--CoA ligase [ADP-forming] subunit alpha-1%2C mitochondrial (Solanum lycopersicum OX%3D4081)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_025599 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g23250 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. No verified direct reference in this release
At5g08300 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0577700 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006099tricarboxylic acid cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.35; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006104succinyl-CoA metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.35; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006105succinate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.35; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.35; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=83.478; coverage=102.374; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=83.478; coverage=102.374; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009361succinate-CoA ligase complex (ADP-forming)Cellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.35; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009505plant-type cell wallCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=83.478; coverage=102.374; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000166nucleotide bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.35; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004775succinate-CoA ligase (ADP-forming) activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.35; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004776succinate-CoA ligase (GDP-forming) activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.35; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005507copper ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=84.412; coverage=100.89; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=83.478; coverage=102.374; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G08300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=83.478; coverage=102.374; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G23250KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=84.412; coverage=100.89; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsly:543943KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=86.31; coverage=99.703; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release