Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_025587 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:113861806-113871490 (-) |
| Description | Similar to PAPP5: Serine/threonine-protein phosphatase 5 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025587 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 42 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g42810 |
Isoform 2 dephosphorylates phosphorylated phytochromes, with a preference toward Pfr forms, and enhances phytochrome-mediated photoresponses, probably by enhancing their stability and their binding affinity for light signal transducers such as NDPK2. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001933 | negative regulation of protein phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006470 | protein dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006913 | nucleocytoplasmic transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010017 | red or far-red light signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010019 | chloroplast-nucleus signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010288 | response to lead ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043278 | response to morphine | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043409 | negative regulation of MAPK cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070262 | peptidyl-serine dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070301 | cellular response to hydrogen peroxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071276 | cellular response to cadmium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902325 | negative regulation of chlorophyll biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904550 | response to arachidonate | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000324 | positive regulation of nuclear receptor-mediated glucocorticoid signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031965 | nuclear membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0101031 | protein folding chaperone complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001965 | G-protein alpha-subunit binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004721 | phosphoprotein phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004722 | protein serine/threonine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016791 | phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030291 | protein serine/threonine kinase inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030544 | Hsp70 protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031072 | heat shock protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031435 | mitogen-activated protein kinase kinase kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043531 | ADP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046906 | tetrapyrrole binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051879 | Hsp90 protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G42810 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.715; coverage=28.463; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:19060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.176; coverage=25.271; evalue=3.35e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:65179 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.176; coverage=25.271; evalue=2.99e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:543849 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=88.199; coverage=17.424; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |