Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_025247 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:108609869-108611418 (-) |
| Description | Similar to PAM16L2: Mitochondrial import inner membrane translocase subunit PAM16 like 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025247 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 16 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g59280 |
Regulates ATP-dependent protein translocation into the mitochondrial matrix (By similarity). |
An Arabidopsis mutant resistant to thaxtomin A, a cellulose synthesis inhibitor from Streptomyces species.2003 · DOI: 10.1105/tpc.013342
|
At5g61880 |
Regulates ATP-dependent protein translocation into the mitochondrial matrix. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002237 | response to molecule of bacterial origin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030150 | protein import into mitochondrial matrix | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031348 | negative regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055085 | transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900425 | negative regulation of defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902289 | negative regulation of defense response to oomycetes | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000012 | regulation of auxin polar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000378 | negative regulation of reactive oxygen species metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001405 | PAM complex, Tim23 associated import motor | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.963; coverage=91.525; evalue=9.28e-13; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005743 | mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019904 | protein domain specific binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.333; coverage=101.695; evalue=1.68e-12; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G59280 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.909; coverage=93.22; evalue=7.7e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G61880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.865; coverage=94.068; evalue=1.26e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG5268 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.188; coverage=99.153; evalue=1.92e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ncr:NCU05515 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.333; coverage=101.695; evalue=1.68e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541152 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.963; coverage=91.525; evalue=9.28e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release |