Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_025061 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:105000068-105002050 (+) |
| Description | Similar to pol: Gag-Pol polyprotein (Fragment) (Avian reticuloendotheliosis virus OX%3D11636) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025061 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015074 | DNA integration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019068 | virion assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.027; coverage=46.333; evalue=1.6e-14; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039657 | symbiont-mediated suppression of host gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.027; coverage=46.333; evalue=1.6e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044826 | viral genome integration into host DNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046718 | symbiont entry into host cell | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0075713 | establishment of integrated proviral latency | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.704; coverage=50.805; evalue=6.5e-15; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019013 | viral nucleocapsid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.027; coverage=46.333; evalue=1.6e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0020002 | host cell plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.027; coverage=46.333; evalue=1.6e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044185 | host cell late endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.027; coverage=46.333; evalue=1.6e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072494 | host multivesicular body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.027; coverage=46.333; evalue=1.6e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003676 | nucleic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.083; coverage=51.521; evalue=6.2e-15; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003887 | DNA-directed DNA polymerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003964 | RNA-directed DNA polymerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004190 | aspartic-type endopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004519 | endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.704; coverage=50.805; evalue=6.5e-15; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004523 | RNA-DNA hybrid ribonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.027; coverage=46.333; evalue=1.6e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039660 | structural constituent of virion | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.027; coverage=46.333; evalue=1.6e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.778; coverage=42.755; evalue=9.98e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | bta:504972 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.083; coverage=51.521; evalue=6.2e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release |