Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_024647 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:95940364-95940999 (-) |
| Description | Similar to PIN1: Peptidyl-prolyl cis-trans isomerase Pin1 (Malus domestica OX%3D3750) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_024647 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g18040 |
Prolyl cis/trans isomerase with specificity for phospho-Ser-Pro bonds. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.652; coverage=95.041; evalue=8.66e-37; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006369 | termination of RNA polymerase II transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.652; coverage=95.041; evalue=8.66e-37; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009630 | gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031398 | positive regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.982; coverage=93.388; evalue=2.91e-35; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032880 | regulation of protein localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045899 | positive regulation of RNA polymerase II transcription preinitiation complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.652; coverage=95.041; evalue=8.66e-37; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051726 | regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0180010 | co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.652; coverage=95.041; evalue=8.66e-37; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000059 | negative regulation of ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.652; coverage=95.041; evalue=8.66e-37; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000749 | positive regulation of rDNA heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.652; coverage=95.041; evalue=8.66e-37; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.833; coverage=99.174; evalue=4.24e-70; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.833; coverage=99.174; evalue=4.24e-70; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000993 | RNA polymerase II complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.652; coverage=95.041; evalue=8.66e-37; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.833; coverage=99.174; evalue=4.24e-70; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140297 | DNA-binding transcription factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.982; coverage=93.388; evalue=2.91e-35; UniProt GO evidence=IPI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140463 | chromatin-protein adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.652; coverage=95.041; evalue=8.66e-37; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G18040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.508; coverage=97.521; evalue=4.65e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG17051 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.982; coverage=93.388; evalue=2.91e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release |