Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_023304 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:31510687-31511493 (+) |
| Description | Similar to COX6B-1: Cytochrome c oxidase subunit 6b-1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_023304 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g22450 |
This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. | No verified direct reference in this release |
At4g28060 |
This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. | No verified direct reference in this release |
At5g57815 |
This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006123 | mitochondrial electron transport, cytochrome c to oxygen | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.545; coverage=68.75; evalue=2.24e-27; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033617 | mitochondrial respiratory chain complex IV assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.545; coverage=58.929; evalue=2.49e-21; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045333 | cellular respiration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.545; coverage=68.75; evalue=2.24e-27; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902600 | proton transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.312; coverage=68.75; evalue=1.59e-51; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.312; coverage=68.75; evalue=1.59e-51; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.312; coverage=68.75; evalue=1.59e-51; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005743 | mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.545; coverage=68.75; evalue=2.24e-27; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005758 | mitochondrial intermembrane space | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.545; coverage=58.929; evalue=2.49e-21; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.333; coverage=66.964; evalue=1.28e-42; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.333; coverage=66.964; evalue=1.28e-42; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.312; coverage=68.75; evalue=1.59e-51; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.667; coverage=66.964; evalue=1.17e-41; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009579 | thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.312; coverage=68.75; evalue=1.59e-51; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031966 | mitochondrial membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.545; coverage=68.75; evalue=2.24e-27; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045277 | respiratory chain complex IV | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.312; coverage=68.75; evalue=1.59e-51; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004129 | cytochrome-c oxidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.545; coverage=58.929; evalue=2.49e-21; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.312; coverage=68.75; evalue=1.59e-51; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G22450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.312; coverage=68.75; evalue=1.59e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G28060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.333; coverage=66.964; evalue=1.28e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G57815 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.667; coverage=66.964; evalue=1.17e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ncr:NCU06741 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.545; coverage=58.929; evalue=2.49e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2538835 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.545; coverage=68.75; evalue=2.24e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release |