Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022732 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:7116871-7117794 (-) |
| Description | Similar to CDC48C: Cell division control protein 48 homolog C (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022732 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 52 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g01610 |
Probably functions in cell division and growth processes. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006274 | DNA replication termination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010564 | regulation of cell cycle process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=IDA:GeneDB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010636 | positive regulation of mitochondrial fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016320 | endoplasmic reticulum membrane fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030970 | retrograde protein transport, ER to cytosol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031134 | sister chromatid biorientation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032984 | protein-containing complex disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034517 | ribophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034727 | piecemeal microautophagy of the nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036503 | ERAD pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042254 | ribosome biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043328 | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043335 | protein unfolding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046034 | ATP metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051228 | mitotic spindle disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070651 | nonfunctional rRNA decay | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071629 | cytoplasm protein quality control by the ubiquitin-proteasome system | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071630 | nuclear protein quality control by the ubiquitin-proteasome system | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072344 | rescue of stalled cytosolic ribosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072671 | mitochondria-associated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097352 | autophagosome maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099638 | endosome to plasma membrane protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120174 | stress-induced homeostatically regulated protein degradation pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140624 | EGAD pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900182 | positive regulation of protein localization to nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902979 | mitotic DNA replication termination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990116 | ribosome-associated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990171 | SCF complex disassembly in response to cadmium stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000837 | Doa10p ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000839 | Hrd1p ubiquitin ligase ERAD-L complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=HDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009524 | phragmoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030894 | replisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034098 | VCP-NPL4-UFD1 AAA ATPase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036266 | Cdc48p-Npl4p-Vms1p AAA ATPase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043332 | mating projection tip | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=HDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990112 | RQC complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019888 | protein phosphatase regulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031593 | polyubiquitin modification-dependent protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043130 | ubiquitin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19; UniProt GO evidence=TAS:GeneDB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990275 | preribosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G01610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.0; coverage=91.743; evalue=1.92e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pfa:PF3D7_0711000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.917; coverage=44.037; evalue=1.43e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YDL126C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.806; coverage=66.055; evalue=1.48e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |