Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022652 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:4127645-4129137 (-) |
| Description | Similar to At3g61320: UPF0187 protein At3g61320%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022652 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 11 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g61320 |
Voltage-dependent chloride (Cl) channel critical for proton motive force (PMF) partitioning across the thylakoid membrane by anion influx into the lumen during illumination, thus being required for photoprotection under fluctuating light conditions. | |
At2g45870 |
Voltage-dependent chloride (Cl) channel probably contributing to proton motive force (PMF) partitioning across the thylakoid membrane by anion influx into the lumen. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006811 | monoatomic ion transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.851; coverage=67.303; evalue=2.29e-24; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010027 | thylakoid membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019684 | photosynthesis, light reaction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042548 | regulation of photosynthesis, light reaction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009533 | chloroplast stromal thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034707 | chloride channel complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042651 | thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005247 | voltage-gated chloride channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ana:alr2987 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.851; coverage=67.303; evalue=2.29e-24 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G45870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.365; coverage=86.396; evalue=1.37e-160 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G61320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.966; coverage=83.055; evalue=4.46e-166 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mlo:mll4386 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.471; coverage=56.802; evalue=1.67e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:sll1024 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.303; coverage=55.131; evalue=1.69e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release |