Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022399 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:149535777-149539641 (+) |
| Description | Similar to VCL1: Protein VACUOLELESS1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022399 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 35 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g38020 |
Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007033 | vacuole organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008333 | endosome to lysosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009860 | pollen tube growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016197 | endosomal transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034058 | endosomal vesicle fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.265; coverage=97.976; evalue=5.95e-136; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035542 | regulation of SNARE complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.265; coverage=97.976; evalue=5.95e-136; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042144 | vacuole fusion, non-autophagic | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045992 | negative regulation of embryonic development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046718 | symbiont entry into host cell | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051469 | vesicle fusion with vacuole | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061909 | autophagosome-lysosome fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097352 | autophagosome maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005764 | lysosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005771 | multivesicular body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005776 | autophagosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005884 | actin filament | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009705 | plant-type vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.364; coverage=100.833; evalue=6.95e-180; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015629 | actin cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.364; coverage=100.833; evalue=6.95e-180; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030136 | clathrin-coated vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030897 | HOPS complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031902 | late endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033263 | CORVET complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055037 | recycling endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003779 | actin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051015 | actin filament binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.294; coverage=100.833; evalue=8.21e-138; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G38020 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.654; coverage=102.738; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:505361 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.022; coverage=97.976; evalue=8.24e-135 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0270754 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.364; coverage=100.833; evalue=6.95e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:64601 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.265; coverage=97.976; evalue=5.95e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release |