Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022376 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:149324329-149325919 (+) |
| Description | Similar to PGPP1: Phosphatidylglycerophosphate phosphatase 1%2C chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022376 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 19 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g58830 |
Phosphatidylglycerophosphate (PGP) phosphatase involved in the biosynthesis of phosphatidylglycerol (PG), a phosphoglycerolipid predominantly present in chloroplastic thylakoid membranes and which has important photosynthetic function; seems to use PGP 34:3, PGP 34:2 and PGP 34:1 as substrates. |
Arabidopsis phosphatidylglycerophosphate phosphatase 1 involved in phosphatidylglycerol biosynthesis and photosynthetic function.2016 · DOI: 10.1111/tpj.13311
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006655 | phosphatidylglycerol biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007006 | mitochondrial membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.257; coverage=48.118; evalue=2.24e-06; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008610 | lipid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008654 | phospholipid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.194; coverage=50.0; evalue=9.65e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010027 | thylakoid membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015979 | photosynthesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032049 | cardiolipin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.558; coverage=34.677; evalue=2.43e-07; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046486 | glycerolipid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046839 | phospholipid dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005743 | mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.257; coverage=48.118; evalue=2.24e-06; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005759 | mitochondrial matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.558; coverage=34.677; evalue=2.43e-07; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031314 | extrinsic component of mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.558; coverage=34.677; evalue=2.43e-07; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008962 | phosphatidylglycerophosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016791 | phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G58830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.811; coverage=62.634; evalue=6.76e-111 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bsu:BSU25680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.194; coverage=50.0; evalue=9.65e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YHR100C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.558; coverage=34.677; evalue=2.43e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2539038 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.257; coverage=48.118; evalue=2.24e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |