Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022114 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:144902927-144908129 (-) |
| Description | Similar to MTM1: Phosphatidylinositol-3-phosphatase myotubularin-1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022114 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 29 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g10550 |
Phosphatase with phosphoinositide 3'-phosphatase activity that can use phosphatidylinositol-3-phosphate (PtdIns3P) and phosphatidylinositol-3,5-diphosphate (PtdIns3,5P(2)) as substrates and produces phosphatidylinositol-5-phosphate (PtdIns5P). | |
At5g04540 |
Phosphatase with phosphoinositide 3'-phosphatase activity that can use phosphatidylinositol-3-phosphate (PtdIns3P) and phosphatidylinositol-3,5-diphosphate (PtdIns3,5P(2)) as substrates and produces phosphatidylinositol-5-phosphate (PtdIns5P). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002091 | negative regulation of receptor internalization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006661 | phosphatidylinositol biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016311 | dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.225; coverage=72.15; evalue=6.38e-93; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035556 | intracellular signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042631 | cellular response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045806 | negative regulation of endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046488 | phosphatidylinositol metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.225; coverage=72.15; evalue=6.38e-93; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046856 | phosphatidylinositol dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060304 | regulation of phosphatidylinositol dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097062 | dendritic spine maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000070 | regulation of response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000643 | positive regulation of early endosome to late endosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000645 | negative regulation of receptor catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005774 | vacuolar membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031410 | cytoplasmic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004438 | phosphatidylinositol-3-phosphate phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004721 | phosphoprotein phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052629 | phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052866 | phosphatidylinositol phosphate phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.225; coverage=72.15; evalue=6.38e-93; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106018 | phosphatidylinositol-3,5-bisphosphate phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G10550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.222; coverage=100.353; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G04540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.203; coverage=99.647; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:536810 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.388; coverage=72.15; evalue=6e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:8898 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.388; coverage=72.15; evalue=1.06e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:77116 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.225; coverage=72.15; evalue=6.38e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release |