Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022100 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:144616158-144618483 (+) |
| Description | Similar to BTR1: Protein BTR1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022100 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g04430 |
Negative regulator of tomato mosaic virus (ToMV) multiplication, but has no effect on the multiplication of cucumber mosaic virus (CMV). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.495; coverage=60.947; evalue=8.58e-28; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.495; coverage=60.947; evalue=8.58e-28; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006396 | RNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=NAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033120 | positive regulation of RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.495; coverage=60.947; evalue=8.58e-28; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046719 | regulation by virus of viral protein levels in host cell | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050684 | regulation of mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.139; coverage=59.763; evalue=6.85e-26; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051252 | regulation of RNA metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.139; coverage=59.763; evalue=6.85e-26; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120163 | negative regulation of cold-induced thermogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.139; coverage=59.763; evalue=6.85e-26; UniProt GO evidence=ISS:YuBioLab | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.139; coverage=59.763; evalue=6.85e-26; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.139; coverage=59.763; evalue=6.85e-26; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.139; coverage=59.763; evalue=6.85e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003727 | single-stranded RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003730 | mRNA 3'-UTR binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.139; coverage=59.763; evalue=6.85e-26; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097157 | pre-mRNA intronic binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.495; coverage=60.947; evalue=8.58e-28; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990825 | sequence-specific mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.139; coverage=59.763; evalue=6.85e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G04430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.911; coverage=93.491; evalue=6.75e-125 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG42670 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.495; coverage=60.947; evalue=8.58e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release |