Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022099 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:144583838-144594830 (-) |
| Description | Similar to neur: Protein neuralized (Drosophila melanogaster OX%3D7227) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022099 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 28 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g59560 |
Possesses E3 ubiquitin-protein ligase activity. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000209 | protein polyubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007219 | Notch signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.429; coverage=5.147; evalue=4.87e-09; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008104 | intracellular protein localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008356 | asymmetric cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008593 | regulation of Notch signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.429; coverage=5.147; evalue=4.87e-09; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030718 | germ-line stem cell population maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045747 | positive regulation of Notch signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045807 | positive regulation of endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070086 | ubiquitin-dependent endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904215 | regulation of protein import into chloroplast stroma | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.667; coverage=8.272; evalue=5.26e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.667; coverage=8.272; evalue=5.26e-08; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.491; coverage=4.871; evalue=1.09e-11; UniProt GO evidence=IEA:EnsemblMetazoa | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.429; coverage=5.147; evalue=4.87e-09; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.667; coverage=8.272; evalue=5.26e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009707 | chloroplast outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.667; coverage=8.272; evalue=5.26e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.667; coverage=8.272; evalue=5.26e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015629 | actin cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.273; coverage=5.055; evalue=1.47e-08; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=ISM:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901981 | phosphatidylinositol phosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G59560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.667; coverage=8.272; evalue=5.26e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG11988 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.491; coverage=4.871; evalue=8.01e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:54492 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.429; coverage=5.147; evalue=4.87e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:240055 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.273; coverage=5.055; evalue=1.47e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |