Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022029 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:143223106-143226984 (+) |
| Description | Similar to PAS1: Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022029 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g54010 |
PPIases accelerate the folding of proteins. |
Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis.2010 · DOI: 10.1105/tpc.109.071209
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.656; coverage=25.738; evalue=5.71e-10; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.656; coverage=25.738; evalue=5.71e-10; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006457 | protein folding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009735 | response to cytokinin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009736 | cytokinin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009826 | unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009880 | embryonic pattern specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010597 | green leaf volatile biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.656; coverage=25.738; evalue=5.71e-10; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030010 | establishment of cell polarity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042761 | very long-chain fatty acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048527 | lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.656; coverage=25.738; evalue=5.71e-10; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.656; coverage=25.738; evalue=5.71e-10; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G54010 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=21.941; evalue=1.18e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sot:102577613 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.656; coverage=25.738; evalue=5.71e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release |