Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022027 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:143064929-143069949 (+) |
| Description | Similar to gag-pol: Gag-Pol polyprotein (Human immunodeficiency virus type 1 group O (isolate MVP5180) OX%3D388816) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022027 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 36 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015074 | DNA integration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039657 | symbiont-mediated suppression of host gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039702 | viral budding via host ESCRT complex | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.851; coverage=24.934; evalue=9.04e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044826 | viral genome integration into host DNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046718 | symbiont entry into host cell | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052151 | symbiont-mediated activation of host apoptosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0075523 | viral translational frameshifting | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0075713 | establishment of integrated proviral latency | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0075732 | viral penetration into host nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000767 | positive regulation of cytoplasmic translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000932 | P-body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06; UniProt GO evidence=HDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019013 | viral nucleocapsid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0020002 | host cell plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042025 | host cell nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043657 | host cell | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055036 | virion membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072494 | host multivesicular body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.851; coverage=24.934; evalue=9.04e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003727 | single-stranded RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003887 | DNA-directed DNA polymerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003964 | RNA-directed DNA polymerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004190 | aspartic-type endopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004523 | RNA-DNA hybrid ribonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004533 | exoribonuclease H activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005198 | structural molecule activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035613 | RNA stem-loop binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.417; coverage=25.464; evalue=2.79e-07; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045182 | translation regulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | sce:YNL255C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=9.814; evalue=3.93e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |