Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_021651`
Query reference	OH1004
Location	Chr04:134261764-134263847 (+)
Description	Similar to LSI2: Silicon efflux transporter LSI2 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_021651 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 16 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

Reference gene ID	Possible function	Papers / DOI
`Os03g0107300`	Silicon efflux transporter involved in silicon transport from the root cells to the apoplast.	An efflux transporter of silicon in rice.2007 · DOI: 10.1038/nature05964 Transporters of arsenite in rice and their role in arsenic accumulation in rice grain.2008 · DOI: 10.1073/pnas.0802361105 Orchestration of three transporters and distinct vascular structures in node for intervascular transfer of silicon in rice.2015 · DOI: 10.1073/pnas.1508987112
`Os10g0547500`	Silicon efflux transporter involved in silicon transport in shoots.	Orchestration of three transporters and distinct vascular structures in node for intervascular transfer of silicon in rice.2015 · DOI: 10.1073/pnas.1508987112

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006583	melanin biosynthetic process from tyrosine	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.387; coverage=93.939; evalue=3.51e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007286	spermatid development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.969; coverage=96.402; evalue=3.29e-19; UniProt GO evidence=IMP:MGI	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008283	cell population proliferation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.969; coverage=96.402; evalue=3.29e-19; UniProt GO evidence=IMP:MGI	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035752	lysosomal lumen pH elevation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.387; coverage=93.939; evalue=3.51e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042438	melanin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.387; coverage=93.939; evalue=3.51e-20; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043473	pigmentation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.969; coverage=96.402; evalue=3.29e-19; UniProt GO evidence=IMP:MGI	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048066	developmental pigmentation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.969; coverage=96.402; evalue=3.29e-19; UniProt GO evidence=IMP:MGI	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0055085	transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.844; coverage=99.621; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005765	lysosomal membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.387; coverage=93.939; evalue=3.51e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.387; coverage=93.939; evalue=3.51e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.844; coverage=99.621; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010008	endosome membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.387; coverage=93.939; evalue=3.51e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.844; coverage=99.621; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005254	chloride channel activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.387; coverage=93.939; evalue=3.51e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015105	arsenite transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.047; coverage=97.348; evalue=7.58e-77; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015446	ATPase-coupled arsenite transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.047; coverage=97.348; evalue=7.58e-77; UniProt GO evidence=IGC:dictyBase	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ddi:DDB_G0289879	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.047; coverage=97.348; evalue=7.58e-77	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os03g0107300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.844; coverage=99.621; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os10g0547500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.869; coverage=101.136; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	hsa:4948	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.387; coverage=93.939; evalue=3.51e-20	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	mmu:18431	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.969; coverage=96.402; evalue=3.29e-19	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4349293	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.869; coverage=101.136; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release