Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021586 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:132852908-132855530 (-) |
| Description | Similar to PHYL2.2: Phytolongin Phyl2.2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021586 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 10 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g52990 |
Non-SNARE longin protein involved in membrane-trafficking machinery. | No verified direct reference in this release |
At4g27840 |
Non-SNARE longin protein involved in membrane-trafficking machinery. | No verified direct reference in this release |
At4g10170 |
Non-SNARE longin protein involved in membrane-trafficking machinery. | No verified direct reference in this release |
At1g33475 |
Non-SNARE longin protein involved in membrane-trafficking machinery. | No verified direct reference in this release |
At3g54300 |
Involved in the targeting and/or fusion of transport vesicles to their target membrane. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006623 | protein targeting to vacuole | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=20.741; evalue=2.62e-07; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007033 | vacuole organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=20.741; evalue=2.62e-07; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.968; coverage=30.617; evalue=5.44e-28; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=20.741; evalue=2.62e-07; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.227; coverage=21.728; evalue=2.01e-12; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=20.741; evalue=2.62e-07; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.968; coverage=30.617; evalue=5.44e-28; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031201 | SNARE complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=20.741; evalue=2.62e-07; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=20.741; evalue=2.62e-07; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033263 | CORVET complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=20.741; evalue=2.62e-07; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G33475 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.227; coverage=21.728; evalue=2.01e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G54300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=20.741; evalue=2.62e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G10170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.716; coverage=40.0; evalue=4.56e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G27840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.984; coverage=30.123; evalue=9.5e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G52990 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.968; coverage=30.617; evalue=5.44e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release |