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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_021554
Query referenceOH1004
LocationChr04:132286602-132288960 (+)
DescriptionSimilar to NAC091: NAC domain-containing protein 91 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_021554 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 26 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g24590 Transcription activator essential for the anti-viral defense called virus basal resistance response pathway. No verified direct reference in this release
At3g49530 Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP).
Cold activation of a plasma membrane-tethered NAC transcription factor induces a pathogen resistance response in Arabidopsis.2010 · DOI: 10.1111/j.1365-313x.2009.04091.x
Proteolytic processing of an Arabidopsis membrane-bound NAC transcription factor is triggered by cold-induced changes in membrane fluidity.2010 · DOI: 10.1042/bj20091762
Controlled nuclear import of the transcription factor NTL6 reveals a cytoplasmic role of SnRK2.8 in the drought-stress response.2012 · DOI: 10.1042/bj20120244
At1g33060 Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). No verified direct reference in this release
At4g35580 Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP).
Identification of a calmodulin-binding NAC protein as a transcriptional repressor in Arabidopsis.2007 · DOI: 10.1074/jbc.m705217200
Regulation of leaf senescence by NTL9-mediated osmotic stress signaling in Arabidopsis.2008 · PMID: 18443413
A NAC transcription factor and SNI1 cooperatively suppress basal pathogen resistance in Arabidopsis thaliana.2012 · DOI: 10.1093/nar/gks683
The Pseudomonas syringae type III effector HopD1 suppresses effector-triggered immunity, localizes to the endoplasmic reticulum, and targets the Arabidopsis transcription factor NTL9.2014 · DOI: 10.1111/nph.12626

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0119966 Transcription factor that functions as a regulator of the jasmonate (JA) signaling pathway.
Disruption of a novel gene for a NAC-domain protein in rice confers resistance to Rice dwarf virus.2009 · DOI: 10.1111/j.1365-313x.2008.03712.x
The NAC transcription factor RIM1 of rice is a new regulator of jasmonate signaling.2010 · DOI: 10.1111/j.1365-313x.2009.04107.x

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0002230positive regulation of defense response to virus by hostBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0002237response to molecule of bacterial originBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=39.02; evalue=9.31e-76; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009615response to virusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009738abscisic acid-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.774; coverage=28.131; evalue=2.15e-50; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016032viral processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031347regulation of defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=39.02; evalue=9.31e-76; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045892negative regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=39.02; evalue=9.31e-76; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051607defense response to virusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070417cellular response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.508; coverage=55.354; evalue=1.35e-85; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071456cellular response to hypoxiaBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=HEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071470cellular response to osmotic stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=39.02; evalue=9.31e-76; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0098542defense response to other organismBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.508; coverage=55.354; evalue=1.35e-85; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1900103positive regulation of endoplasmic reticulum unfolded protein responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.508; coverage=55.354; evalue=1.35e-85; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1900426positive regulation of defense response to bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=39.02; evalue=9.31e-76; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005789endoplasmic reticulum membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=39.02; evalue=9.31e-76; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.508; coverage=55.354; evalue=1.35e-85; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0012505endomembrane systemCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.141; coverage=35.935; evalue=5.94e-75; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003713transcription coactivator activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005516calmodulin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=39.02; evalue=9.31e-76; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G33060KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.141; coverage=35.935; evalue=5.94e-75UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G49530KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.508; coverage=55.354; evalue=1.35e-85UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G35580KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=39.02; evalue=9.31e-76UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G24590KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.765; coverage=58.802; evalue=7.92e-87UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0119966KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.774; coverage=28.131; evalue=2.15e-50UniProtKB/Swiss-Prot DAT 2026 current_release