Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_021156`
Query reference	OH1004
Location	Chr04:122858307-122860376 (-)
Description	Similar to UPS2: Ureide permease 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_021156 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g03530`	Proton-coupled transporter that transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine.	UPS1 and UPS2 from Arabidopsis mediate high affinity transport of uracil and 5-fluorouracil.2004 · DOI: 10.1074/jbc.m405433200
`At2g03590`	Proton-coupled transporter that transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine.	A novel superfamily of transporters for allantoin and other oxo derivatives of nitrogen heterocyclic compounds in Arabidopsis.2002 · DOI: 10.1105/tpc.010458 UPS1 and UPS2 from Arabidopsis mediate high affinity transport of uracil and 5-fluorouracil.2004 · DOI: 10.1074/jbc.m405433200 Heterologous expression of a plant uracil transporter in yeast: improvement of plasma membrane targeting in mutants of the Rsp5p ubiquitin protein ligase.2006 · DOI: 10.1002/biot.200500034
`At2g03520`	Proton-coupled transporter that transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds.	No verified direct reference in this release
`At1g26440`	Proton-coupled transporter that transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine.	Comparative studies on Ureide Permeases in Arabidopsis thaliana and analysis of two alternative splice variants of AtUPS5.2006 · DOI: 10.1007/s00425-006-0315-z

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015720	allantoin transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015857	uracil transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043100	pyrimidine nucleobase salvage	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0; UniProt GO evidence=TAS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071705	nitrogen compound transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005802	trans-Golgi network	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009504	cell plate	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0099503	secretory vesicle	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005274	allantoin:proton symporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015210	uracil transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015505	uracil:monoatomic cation symporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.213; coverage=92.383; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042907	xanthine transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140318	protein transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G26440	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.706; coverage=100.246; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G03520	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.576; coverage=98.526; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G03530	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.131; coverage=97.789; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G03590	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=76.59; coverage=96.56; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release