Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021069 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:120592820-120597507 (-) |
| Description | Similar to APC2: Anaphase-promoting complex subunit 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021069 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g04660 |
Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007091 | metaphase/anaphase transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007346 | regulation of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009561 | megagametogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010629 | negative regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.94; coverage=77.225; evalue=3.36e-84; UniProt GO evidence=IC:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031145 | anaphase-promoting complex-dependent catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.67; coverage=60.231; evalue=8.64e-69; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051445 | regulation of meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070936 | protein K48-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070979 | protein K11-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141198 | protein branched polyubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000151 | ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005680 | anaphase-promoting complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G04660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.766; coverage=101.387; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0276377 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.94; coverage=77.225; evalue=3.36e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:29882 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.349; coverage=72.832; evalue=1.38e-122 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:99152 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.971; coverage=96.185; evalue=2.16e-118 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:3361204 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.67; coverage=60.231; evalue=8.64e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release |