Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_020596 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:93838660-93848102 (-) |
| Description | Similar to DCAF1: DDB1- and CUL4-associated factor homolog 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_020596 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 27 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g31160 |
Component of the CUL4-RBX1-DDB1-DCAF1 E3 ubiquitin-protein ligase complex, DCAF1 may function as the substrate recognition module within this complex. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010154 | fruit development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035212 | cell competition in a multicellular organism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043687 | post-translational protein modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045732 | positive regulation of protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048827 | phyllome development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097510 | base-excision repair, AP site formation via deaminated base removal | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.7; coverage=36.781; evalue=6.88e-56; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001650 | fibrillar center | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008180 | COP9 signalosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.7; coverage=36.781; evalue=6.88e-56; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031464 | Cul4A-RING E3 ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.7; coverage=36.781; evalue=6.88e-56; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030331 | nuclear estrogen receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990244 | histone H2AT120 kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990756 | ubiquitin-like ligase-substrate adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G31160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.524; coverage=102.44; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_ZK1251.9 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.525; coverage=70.889; evalue=6.75e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:9730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.534; coverage=69.843; evalue=1.57e-115 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:321006 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.7; coverage=36.781; evalue=6.88e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release |