Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_020041 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:48107529-48110080 (+) |
| Description | Similar to FHY: Bifunctional riboflavin kinase/FMN phosphatase (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_020041 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g21470 |
Bifunctional enzyme that catalyzes the hydrolysis of flavin-mononucleotide (FMN) to riboflavin (vitamin B2) and the phosphorylation of riboflavin to form (FMN) coenzyme. | No verified direct reference in this release |
At5g57440 |
Acts as a glycerol-3-phosphatase with higher stereospecificity for L-glycerol-3-phosphate than DL-glycerol-3- phosphate. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006114 | glycerol biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.593; coverage=58.128; evalue=4.56e-35; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006771 | riboflavin metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009117 | nucleotide metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.404; coverage=56.158; evalue=1.99e-37; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009231 | riboflavin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009398 | FMN biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016311 | dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.593; coverage=58.128; evalue=4.56e-35; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.593; coverage=58.128; evalue=4.56e-35; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.593; coverage=58.128; evalue=4.56e-35; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000121 | sn-glycerol 1-phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.593; coverage=58.128; evalue=4.56e-35; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003919 | FMN adenylyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008531 | riboflavin kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016791 | phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.404; coverage=56.158; evalue=1.99e-37; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043136 | sn-glycerol 3-phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.593; coverage=58.128; evalue=4.56e-35; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.404; coverage=56.158; evalue=1.99e-37; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050308 | sugar-phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.593; coverage=58.128; evalue=4.56e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090711 | FMN hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990738 | pseudouridine 5'-phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.404; coverage=56.158; evalue=1.99e-37; UniProt GO evidence=ISS:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G21470 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.385; coverage=89.655; evalue=9.94e-89 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G57440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.593; coverage=58.128; evalue=4.56e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG15441 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.404; coverage=56.158; evalue=1.99e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:8226 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.842; coverage=54.433; evalue=5e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:67365 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.053; coverage=55.665; evalue=6.04e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release |