Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_018935 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:20162902-20168393 (+) |
| Description | Similar to At4g02110: BRCT domain-containing protein At4g02110 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018935 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 43 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g02110 |
BRCT domain-containing protein At4g02110. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000076 | DNA replication checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.053; coverage=15.681; evalue=4.85e-113; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006270 | DNA replication initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006277 | DNA amplification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IMP:Xenbase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.053; coverage=15.681; evalue=4.85e-113; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007095 | mitotic G2 DNA damage checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016925 | protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030174 | regulation of DNA-templated DNA replication initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031334 | positive regulation of protein-containing complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032204 | regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033138 | positive regulation of peptidyl-serine phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033314 | mitotic DNA replication checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034184 | positive regulation of maintenance of mitotic sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035563 | positive regulation of chromatin binding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045860 | positive regulation of protein kinase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051276 | chromosome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071163 | DNA replication preinitiation complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071165 | GINS complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071168 | protein localization to chromatin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097681 | double-strand break repair via alternative nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140588 | chromatin looping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990166 | protein localization to site of double-strand break | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000781 | positive regulation of double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000786 | nucleosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000922 | spindle pole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.053; coverage=15.681; evalue=4.85e-113; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.053; coverage=15.681; evalue=4.85e-113; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042405 | nuclear inclusion body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070532 | BRCA1-B complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019900 | kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043539 | protein serine/threonine kinase activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140031 | phosphorylation-dependent protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140463 | chromatin-protein adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.244; coverage=14.099; evalue=2.19e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G02110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.053; coverage=15.681; evalue=4.85e-113 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:84250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.444; coverage=15.475; evalue=1.75e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:398573 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.244; coverage=14.099; evalue=2.63e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release |