Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_018495 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:13766882-13768748 (+) |
| Description | Similar to PRFB3: Peptide chain release factor PrfB3%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018495 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g57190 |
Involved in the light- and stress-dependent regulation of stability of 3' processed petB transcripts, thus regulating cytochrome b6 accumulation, a rate-limiting step in photosynthetic electron transport. | |
At5g36170 |
Directs the termination of translation in response to the peptide chain termination codon UGA. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006396 | RNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.531; coverage=95.894; evalue=1.5e-77; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006415 | translational termination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.531; coverage=95.894; evalue=1.5e-77; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009657 | plastid organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.531; coverage=95.894; evalue=1.5e-77; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.249; coverage=97.101; evalue=4.01e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043488 | regulation of mRNA stability | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.249; coverage=97.101; evalue=4.01e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0075523 | viral translational frameshifting | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.048; coverage=80.193; evalue=1.43e-63; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.048; coverage=80.193; evalue=1.43e-63; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.249; coverage=97.101; evalue=4.01e-127; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.249; coverage=97.101; evalue=4.01e-127; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003730 | mRNA 3'-UTR binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.249; coverage=97.101; evalue=4.01e-127; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003747 | translation release factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.249; coverage=97.101; evalue=4.01e-127; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016149 | translation release factor activity, codon specific | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.531; coverage=95.894; evalue=1.5e-77; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.249; coverage=97.101; evalue=4.01e-127; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G57190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.249; coverage=97.101; evalue=4.01e-127 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G36170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.531; coverage=95.894; evalue=1.5e-77 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cyp:PCC8801_3422 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.28; coverage=79.227; evalue=1.55e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:sll1865 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.048; coverage=80.193; evalue=1.43e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syw:SYNW2311 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.731; coverage=80.676; evalue=4.48e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release |