Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_018381`
Query reference	OH1004
Location	Chr04:12294291-12298661 (+)
Description	Similar to MTERF8: Transcription termination factor MTERF8%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_018381 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 24 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g54180`	Transcription termination factor that is transcriptionally active in chloroplasts.	No verified direct reference in this release
`At5g55580`	Transcription termination factor required for processing and steady-state levels of plastid transcripts.	Mutations in the plant-conserved MTERF9 alter chloroplast gene expression, development and tolerance to abiotic stress in Arabidopsis thaliana.2015 · DOI: 10.1111/ppl.12307
`At4g38160`	Transcription termination factor essential for chloroplast development.	No verified direct reference in this release
`At2g03050`	Transcription termination factor required for plastid- specific rRNA accumulation and protein synthesis in plastids.	A mutation in the Arabidopsis mTERF-related plastid protein SOLDAT10 activates retrograde signaling and suppresses (1)O(2)-induced cell death.2009 · DOI: 10.1111/j.1365-313x.2009.03965.x

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006353	DNA-templated transcription termination	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006393	termination of mitochondrial transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=19.565; coverage=42.368; evalue=5.25e-07; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008033	tRNA processing	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.699; coverage=21.842; evalue=1.95e-06; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009658	chloroplast organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=19.565; coverage=42.368; evalue=5.25e-07; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009793	embryo development ending in seed dormancy	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.467; coverage=18.026; evalue=5.06e-06; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010343	singlet oxygen-mediated programmed cell death	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015979	photosynthesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=19.565; coverage=42.368; evalue=5.25e-07; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032502	developmental process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048364	root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048367	shoot system development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071452	cellular response to singlet oxygen	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.467; coverage=18.026; evalue=5.06e-06; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1904821	chloroplast disassembly	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=19.565; coverage=42.368; evalue=5.25e-07; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=19.565; coverage=42.368; evalue=5.25e-07; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042644	chloroplast nucleoid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=19.565; coverage=42.368; evalue=5.25e-07; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042651	thylakoid membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.699; coverage=21.842; evalue=1.95e-06; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003676	nucleic acid binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.699; coverage=21.842; evalue=1.95e-06; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003690	double-stranded DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.699; coverage=21.842; evalue=1.95e-06; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003723	RNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.699; coverage=21.842; evalue=1.95e-06; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003727	single-stranded RNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.699; coverage=21.842; evalue=1.95e-06; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003729	mRNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=19.565; coverage=42.368; evalue=5.25e-07; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G03050	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.467; coverage=18.026; evalue=5.06e-06	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G38160	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.699; coverage=21.842; evalue=1.95e-06	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G54180	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=19.565; coverage=42.368; evalue=5.25e-07	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G55580	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.323; coverage=17.5; evalue=8.47e-07	UniProtKB/Swiss-Prot DAT 2026 current_release