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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_018239
Query referenceOH1004
LocationChr04:9281929-9285308 (-)
DescriptionSimilar to MBD10: Methyl-CpG-binding domain-containing protein 10 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_018239 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 4 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g15340 Probable transcriptional regulator (By similarity).
Multimegabase silencing in nucleolar dominance involves siRNA-directed DNA methylation and specific methylcytosine-binding proteins.2008 · DOI: 10.1016/j.molcel.2008.11.009
At3g15790 Transcriptional regulator that binds DNA independently of its methylation status.
Ten members of the Arabidopsis gene family encoding methyl-CpG-binding domain proteins are transcriptionally active and at least one, AtMBD11, is crucial for normal development.2003 · DOI: 10.1093/nar/gkg735
Arabidopsis MBD proteins show different binding specificities and nuclear localization.2003 · DOI: 10.1023/b:plan.0000019118.56822.a9

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.815; coverage=38.434; evalue=2.7e-41; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.815; coverage=38.434; evalue=2.7e-41; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.815; coverage=38.434; evalue=2.7e-41; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008327methyl-CpG bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.815; coverage=38.434; evalue=2.7e-41; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G15340KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.815; coverage=38.434; evalue=2.7e-41UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G15790KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.261; coverage=39.502; evalue=1.17e-38UniProtKB/Swiss-Prot DAT 2026 current_release