Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_018237 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:9218056-9220649 (-) |
| Description | Similar to BRIZ1: BRAP2 RING ZnF UBP domain-containing protein 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018237 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g42160 |
RING-type ubiquitin E3 ligase required for seed germination and post-germination growth. | |
At2g26000 |
RING-type ubiquitin E3 ligase that binds ubiquitin and is required for seed germination and post-germination growth. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000165 | MAPK cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.222; coverage=90.909; evalue=5.83e-74; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007265 | Ras protein signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009968 | negative regulation of signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.222; coverage=90.909; evalue=5.83e-74; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010029 | regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0023051 | regulation of signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.149; coverage=95.152; evalue=3.66e-59; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000151 | ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IC:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.303; coverage=96.162; evalue=1.47e-71; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.222; coverage=90.909; evalue=5.83e-74; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.68; coverage=81.414; evalue=6.92e-111; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031965 | nuclear membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.303; coverage=96.162; evalue=1.47e-71; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003676 | nucleic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.222; coverage=90.909; evalue=5.83e-74; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008139 | nuclear localization sequence binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.222; coverage=90.909; evalue=5.83e-74; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.222; coverage=90.909; evalue=5.83e-74; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043130 | ubiquitin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.68; coverage=81.414; evalue=6.92e-111; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G26000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.68; coverage=81.414; evalue=6.92e-111 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G42160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.905; coverage=100.404; evalue=1.77e-172 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:8315 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.222; coverage=90.909; evalue=5.83e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:72399 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.303; coverage=96.162; evalue=1.47e-71 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2542333 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.149; coverage=95.152; evalue=3.66e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release |